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ks_Singcellmean_heatmap(object = sce_cca,
marker_cluster = df_markers,
group.by = "celltype",
cellOrder = c("Myonuclei","NPCs","SMC","Tenocytes",
"Adipocytes","Endothelial","Macrophages",
"Mesenchymal","MuSCs","Myoblasts"),
cell_cols = c("#edc951","#8AAD05","#cc2a36","#4f372d","#00a0b0","#7A989A",
"#849271","#CF9546","#C67052","#C1AE8D"),
text_size=9,
gene_anno = F)
ks_Singcellmean_heatmap(object = sce_cca,
marker_cluster = df_markers,
group.by = "celltype",
cellOrder = c("Myonuclei","NPCs","SMC","Tenocytes",
"Adipocytes","Endothelial","Macrophages",
"Mesenchymal","MuSCs","Myoblasts"),
cell_cols = c("#edc951","#8AAD05","#cc2a36","#4f372d","#00a0b0","#7A989A",
"#849271","#CF9546","#C67052","#C1AE8D"),
text_size=9,
gene_anno = T)
ks_Singcellmean_heatmap(object = sce_cca,
marker_cluster = df_markers,
group.by = "celltype",
cellOrder = c("Myonuclei","NPCs","SMC","Tenocytes",
"Adipocytes","Endothelial","Macrophages",
"Mesenchymal","MuSCs","Myoblasts"),
cell_cols = c("#edc951","#8AAD05","#cc2a36","#4f372d","#00a0b0","#7A989A",
"#849271","#CF9546","#C67052","#C1AE8D"),
text_size=9,
direction="vertical",
gene_anno=F)
或者这样:
ks_Singcellmean_heatmap(object = sce_cca,
marker_cluster = df_markers,
group.by = "celltype",
cellOrder = c("Myonuclei","NPCs","SMC","Tenocytes",
"Adipocytes","Endothelial","Macrophages",
"Mesenchymal","MuSCs","Myoblasts"),
cell_cols = c("#edc951","#8AAD05","#cc2a36","#4f372d","#00a0b0","#7A989A",
"#849271","#CF9546","#C67052","#C1AE8D"),
text_size=9,
direction="vertical",
gene_anno=T)
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